Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 AC069224.1-201ENST00000566372 1715 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 FAM90A2P-201ENST00000511144 1395 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 FAM90A25P-201ENST00000528404 1395 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 AC084752.1-201ENST00000509766 622 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 RN7SL470P-201ENST00000583069 259 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 SIGLEC18P-201ENST00000602271 909 ntBASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC10.12□□□□□ -0.79
ALMS1Q8TCU4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 KRT18P9-201ENST00000604826 1300 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC106047.2-201ENST00000511723 743 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL451007.2-201ENST00000632004 563 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC011270.2-201ENST00000624293 2550 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC092638.2-201ENST00000441105 947 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL354861.1-201ENST00000445213 355 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 MIR3188-201ENST00000583494 85 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL139339.2-201ENST00000608063 657 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AC007292.2-201ENST00000593524 1812 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 RNA5SP359-201ENST00000364838 113 ntBASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.11□□□□□ -0.79
ALMS1Q8TCU4 AL807761.2-201ENST00000422849 729 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms