Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 MIR1909-201ENST00000411312 80 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 NUS1P3-201ENST00000423502 862 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AC022137.2-201ENST00000503482 481 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AL022328.1-201ENST00000610050 478 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AP005019.2-201ENST00000615104 511 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AC008741.2-201ENST00000612792 3115 ntBASIC16.62■□□□□ 0.25
BEST2Q8NFU1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.62■□□□□ 0.25
BEST2Q8NFU1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AC005229.1-201ENST00000392885 409 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AC234783.1-201ENST00000441761 496 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 KRT18P25-201ENST00000508931 1278 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AP001889.1-201ENST00000525414 633 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.61■□□□□ 0.25
BEST2Q8NFU1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BEST2Q8NFU1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.6■□□□□ 0.25
BEST2Q8NFU1 AC119751.2-201ENST00000504529 210 ntBASIC16.6■□□□□ 0.25
BEST2Q8NFU1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms