Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
COL27A1Q8IZC6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AC018629.1-201ENST00000623381 1736 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AC100827.2-201ENST00000563214 1194 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 MIR3147-201ENST00000577811 66 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 RN7SL163P-201ENST00000583100 276 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AC073352.2-201ENST00000609385 439 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AL590440.2-201ENST00000641973 1595 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 AL139384.1-201ENST00000612143 3047 ntBASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
COL27A1Q8IZC6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AC112693.3-201ENST00000624819 1983 ntBASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AC006122.1-201ENST00000493323 440 ntBASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AC087481.3-201ENST00000602886 1894 ntBASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
COL27A1Q8IZC6 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.18□□□□□ -0.14
COL27A1Q8IZC6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms