Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 MBP-227ENST00000526111 581 ntTSL 4 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 RPL17P45-201ENST00000586289 509 ntBASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 WDR7-208ENST00000589935 544 ntTSL 4 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 MIR7845-201ENST00000618396 99 ntBASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AC018629.1-201ENST00000623381 1736 ntBASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 AL139384.1-201ENST00000612143 3047 ntBASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CDC42BPAQ5VT25 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 AP005117.1-202ENST00000581724 1908 ntBASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 RPSAP31-201ENST00000416648 895 ntBASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 AL590440.2-201ENST00000641973 1595 ntBASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.8■■□□□ 1.24
CDC42BPAQ5VT25 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 CFL1-206ENST00000527344 962 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 MIR6720-201ENST00000611664 98 ntBASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AC011491.1-203ENST00000637688 543 ntBASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AL513523.2-202ENST00000427283 2040 ntBASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 DKFZP434H168-201ENST00000567381 1905 ntBASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CDC42BPAQ5VT25 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 PCDHB19P-201ENST00000570871 2371 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC026316.1-201ENST00000398900 414 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC098935.1-201ENST00000446057 611 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 CTBP2P4-201ENST00000513884 920 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC007881.3-201ENST00000608897 607 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC073352.2-201ENST00000609385 439 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AL353726.2-201ENST00000623259 884 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 LILRP1-201ENST00000444199 1370 ntBASIC22.78■■□□□ 1.24
CDC42BPAQ5VT25 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms