Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 AC007541.1-201ENST00000570282 1469 ntBASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN20Q4JDL3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AC026410.3-201ENST00000514280 936 ntBASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 API5-211ENST00000534695 560 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 CHCHD2P3-201ENST00000603038 451 ntBASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 AC107373.2-201ENST00000607735 490 ntBASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN20Q4JDL3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AC093726.1-201ENST00000608064 963 ntBASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTPN20Q4JDL3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PTPN20Q4JDL3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms