Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC018529.1-201ENST00000613063 361 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 CICP13-201ENST00000422015 2789 ntBASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CHRFAM7AQ494W8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 TSSK5P-201ENST00000423978 907 ntBASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 HILS1-202ENST00000545329 423 ntBASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 AC140912.1-201ENST00000577171 1054 ntBASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 AC021097.1-201ENST00000607902 574 ntBASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.67□□□□□ -0.22
CHRFAM7AQ494W8 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AL353779.1-201ENST00000434793 351 ntBASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 GIMAP3P-201ENST00000495150 836 ntBASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.66□□□□□ -0.22
CHRFAM7AQ494W8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms