Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AC073413.1-201ENST00000603927 732 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ZACNP1-201ENST00000612259 710 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AC126365.1-201ENST00000578585 1514 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AC015818.8-201ENST00000587907 1519 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AL162727.3-201ENST00000635661 2787 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC020907.1-201ENST00000616460 1350 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC112693.3-201ENST00000624819 1983 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC087481.3-201ENST00000602886 1894 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AL591846.1-201ENST00000451736 433 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 FTLP10-202ENST00000505798 471 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC026434.2-201ENST00000506094 1078 ntBASIC18.36■□□□□ 0.53
PDS5AQ29RF7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.36■□□□□ 0.53
PDS5AQ29RF7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AL157414.3-201ENST00000624276 1954 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 MIR326-201ENST00000362220 95 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AC079178.1-201ENST00000420915 656 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 MTX1P1-201ENST00000440904 838 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 RPSAP36-202ENST00000494591 1261 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 COX5BP1-201ENST00000507622 393 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 MIR4741-201ENST00000579822 90 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 AC004466.1-201ENST00000599515 1080 ntBASIC18.35■□□□□ 0.53
PDS5AQ29RF7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.35■□□□□ 0.53
PDS5AQ29RF7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms