Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SREBF2Q12772 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SREBF2Q12772 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.46■□□□□ 0.38
SREBF2Q12772 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SREBF2Q12772 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SREBF2Q12772 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SREBF2Q12772 AL008718.2-201ENST00000609206 1313 ntBASIC17.46■□□□□ 0.38
SREBF2Q12772 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.45■□□□□ 0.38
SREBF2Q12772 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 AC084364.1-201ENST00000551967 1556 ntBASIC17.45■□□□□ 0.38
SREBF2Q12772 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SREBF2Q12772 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SREBF2Q12772 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 CAP2P1-201ENST00000557743 1390 ntBASIC17.45■□□□□ 0.38
SREBF2Q12772 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 PIN4P1-201ENST00000451079 396 ntBASIC17.45■□□□□ 0.38
SREBF2Q12772 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.45■□□□□ 0.38
SREBF2Q12772 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.45■□□□□ 0.38
SREBF2Q12772 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.45■□□□□ 0.38
SREBF2Q12772 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.45■□□□□ 0.38
SREBF2Q12772 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 AC007881.3-201ENST00000608897 607 ntBASIC17.45■□□□□ 0.38
SREBF2Q12772 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.45■□□□□ 0.38
SREBF2Q12772 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.45■□□□□ 0.38
SREBF2Q12772 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SREBF2Q12772 KRT8P21-201ENST00000430398 1491 ntBASIC17.44■□□□□ 0.38
SREBF2Q12772 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SREBF2Q12772 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.44■□□□□ 0.38
SREBF2Q12772 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
SREBF2Q12772 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SREBF2Q12772 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SREBF2Q12772 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SREBF2Q12772 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 AC026320.2-201ENST00000434379 478 ntBASIC17.44■□□□□ 0.38
SREBF2Q12772 AC012362.1-201ENST00000434906 739 ntBASIC17.44■□□□□ 0.38
SREBF2Q12772 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.44■□□□□ 0.38
SREBF2Q12772 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.44■□□□□ 0.38
SREBF2Q12772 AC005632.3-201ENST00000605544 308 ntBASIC17.44■□□□□ 0.38
SREBF2Q12772 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.44■□□□□ 0.38
SREBF2Q12772 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SREBF2Q12772 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 FAM90A7P-201ENST00000382628 1395 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 FAM90A23P-201ENST00000400136 1395 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 AL512430.1-201ENST00000392575 860 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 AC078875.1-201ENST00000431907 724 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.43■□□□□ 0.38
SREBF2Q12772 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.43■□□□□ 0.38
SREBF2Q12772 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 AC009884.2-201ENST00000603110 324 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 AL109837.1-201ENST00000603272 613 ntBASIC17.43■□□□□ 0.38
SREBF2Q12772 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SREBF2Q12772 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms