Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDH13P55290 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH13P55290 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH13P55290 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 AC139749.1-202ENST00000617529 3139 ntBASIC15.21■□□□□ 0.03
CDH13P55290 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 RPL5P21-201ENST00000404620 815 ntBASIC15.21■□□□□ 0.03
CDH13P55290 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH13P55290 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH13P55290 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH13P55290 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH13P55290 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.21■□□□□ 0.03
CDH13P55290 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH13P55290 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH13P55290 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH13P55290 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
CDH13P55290 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDH13P55290 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
CDH13P55290 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH13P55290 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CDH13P55290 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH13P55290 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH13P55290 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH13P55290 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH13P55290 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 UPF3AP3-201ENST00000420996 769 ntBASIC15.2■□□□□ 0.02
CDH13P55290 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 KRT18P64-201ENST00000434946 1219 ntBASIC15.2■□□□□ 0.02
CDH13P55290 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
CDH13P55290 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 AL589739.1-201ENST00000607720 493 ntBASIC15.2■□□□□ 0.02
CDH13P55290 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CDH13P55290 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH13P55290 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH13P55290 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 MIR600HG-201ENST00000449175 5984 ntBASIC15.2■□□□□ 0.02
CDH13P55290 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
CDH13P55290 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH13P55290 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms