Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EMP3P54852 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
EMP3P54852 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EMP3P54852 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EMP3P54852 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
EMP3P54852 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.27■□□□□ 0.04
EMP3P54852 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.27■□□□□ 0.04
EMP3P54852 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC15.27■□□□□ 0.04
EMP3P54852 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
EMP3P54852 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 AC009477.1-201ENST00000452936 217 ntBASIC15.27■□□□□ 0.04
EMP3P54852 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.27■□□□□ 0.04
EMP3P54852 AC104629.2-201ENST00000468627 598 ntBASIC15.27■□□□□ 0.04
EMP3P54852 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
EMP3P54852 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.27■□□□□ 0.04
EMP3P54852 OR8K4P-201ENST00000534608 872 ntBASIC15.27■□□□□ 0.04
EMP3P54852 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
EMP3P54852 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.27■□□□□ 0.04
EMP3P54852 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.27■□□□□ 0.04
EMP3P54852 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
EMP3P54852 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.27■□□□□ 0.04
EMP3P54852 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
EMP3P54852 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.27■□□□□ 0.04
EMP3P54852 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.27■□□□□ 0.03
EMP3P54852 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
EMP3P54852 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
EMP3P54852 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.27■□□□□ 0.03
EMP3P54852 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
EMP3P54852 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.27■□□□□ 0.03
EMP3P54852 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
EMP3P54852 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.27■□□□□ 0.03
EMP3P54852 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.27■□□□□ 0.03
EMP3P54852 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.27■□□□□ 0.03
EMP3P54852 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
EMP3P54852 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
EMP3P54852 BTBD7P1-201ENST00000447253 1453 ntBASIC15.27■□□□□ 0.03
EMP3P54852 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC15.27■□□□□ 0.03
EMP3P54852 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.27■□□□□ 0.03
EMP3P54852 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 AL136982.4-201ENST00000437689 1740 ntBASIC15.26■□□□□ 0.03
EMP3P54852 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
EMP3P54852 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
EMP3P54852 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.26■□□□□ 0.03
EMP3P54852 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC15.26■□□□□ 0.03
EMP3P54852 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 FAM207CP-201ENST00000443486 507 ntBASIC15.26■□□□□ 0.03
EMP3P54852 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC15.26■□□□□ 0.03
EMP3P54852 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.26■□□□□ 0.03
EMP3P54852 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.26■□□□□ 0.03
EMP3P54852 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.26■□□□□ 0.03
EMP3P54852 AC126365.2-201ENST00000580630 379 ntBASIC15.26■□□□□ 0.03
EMP3P54852 AL844908.2-201ENST00000609461 460 ntBASIC15.26■□□□□ 0.03
EMP3P54852 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.26■□□□□ 0.03
EMP3P54852 AL033527.5-202ENST00000641632 1098 ntBASIC15.26■□□□□ 0.03
EMP3P54852 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.26■□□□□ 0.03
EMP3P54852 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.26■□□□□ 0.03
EMP3P54852 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
EMP3P54852 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms