Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EPHB3P54753 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.11■□□□□ 0.17
EPHB3P54753 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
EPHB3P54753 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EPHB3P54753 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.11■□□□□ 0.17
EPHB3P54753 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 KRT8P44-201ENST00000441609 1350 ntBASIC16.11■□□□□ 0.17
EPHB3P54753 AL513523.2-202ENST00000427283 2040 ntBASIC16.11■□□□□ 0.17
EPHB3P54753 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EPHB3P54753 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
EPHB3P54753 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 Z93015.1-201ENST00000451718 390 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.1■□□□□ 0.17
EPHB3P54753 ECM1P1-201ENST00000604092 1279 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 MIR6787-201ENST00000616675 61 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 PCDHB19P-201ENST00000570871 2371 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
EPHB3P54753 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.1■□□□□ 0.17
EPHB3P54753 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 AC020907.1-201ENST00000616460 1350 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 AC084018.2-201ENST00000613093 2607 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EPHB3P54753 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.1■□□□□ 0.17
EPHB3P54753 KRT8P14-201ENST00000414254 1442 ntBASIC16.1■□□□□ 0.17
EPHB3P54753 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 AL354989.2-201ENST00000435838 1540 ntBASIC16.09■□□□□ 0.17
EPHB3P54753 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHB3P54753 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHB3P54753 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
EPHB3P54753 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.09■□□□□ 0.17
EPHB3P54753 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
EPHB3P54753 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.09■□□□□ 0.17
EPHB3P54753 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.09■□□□□ 0.17
EPHB3P54753 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.09■□□□□ 0.17
EPHB3P54753 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHB3P54753 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
EPHB3P54753 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.09■□□□□ 0.17
EPHB3P54753 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms