Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 LINC00554-201ENST00000564841 3011 ntBASIC13.4□□□□□ -0.26
HCFC1P51610 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 KRT8P14-201ENST00000414254 1442 ntBASIC13.4□□□□□ -0.26
HCFC1P51610 HYMAI-201ENST00000635591 3347 ntBASIC13.4□□□□□ -0.26
HCFC1P51610 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HCFC1P51610 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.4□□□□□ -0.26
HCFC1P51610 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.4□□□□□ -0.26
HCFC1P51610 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.4□□□□□ -0.26
HCFC1P51610 AL596257.1-201ENST00000641463 2694 ntBASIC13.4□□□□□ -0.26
HCFC1P51610 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.4□□□□□ -0.26
HCFC1P51610 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HCFC1P51610 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HCFC1P51610 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.4□□□□□ -0.27
HCFC1P51610 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HCFC1P51610 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HCFC1P51610 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HCFC1P51610 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 AL139094.1-201ENST00000405549 1188 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 TMEM198B-204ENST00000484016 896 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC100850.1-201ENST00000506768 649 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.39□□□□□ -0.27
HCFC1P51610 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 AP001505.2-201ENST00000616815 443 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 AC091544.8-201ENST00000619490 361 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.39□□□□□ -0.27
HCFC1P51610 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 AL158070.2-201ENST00000623713 1621 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 PRAL-201ENST00000624952 3286 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.39□□□□□ -0.27
HCFC1P51610 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HCFC1P51610 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.39□□□□□ -0.27
HCFC1P51610 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.39□□□□□ -0.27
HCFC1P51610 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.39□□□□□ -0.27
HCFC1P51610 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.39□□□□□ -0.27
HCFC1P51610 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms