Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.68□□□□□ -0.22
CX3CR1P49238 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AC004967.1-201ENST00000453589 447 ntBASIC13.68□□□□□ -0.22
CX3CR1P49238 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.68□□□□□ -0.22
CX3CR1P49238 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 AC027612.4-201ENST00000605371 583 ntBASIC13.68□□□□□ -0.22
CX3CR1P49238 LINC00628-201ENST00000628516 1289 ntBASIC13.68□□□□□ -0.22
CX3CR1P49238 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.68□□□□□ -0.22
CX3CR1P49238 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CX3CR1P49238 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
CX3CR1P49238 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CR1P49238 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 LINC01101-201ENST00000622953 1884 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CX3CR1P49238 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CR1P49238 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CR1P49238 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 RPL5P21-201ENST00000404620 815 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 AL080243.2-201ENST00000418783 582 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.67□□□□□ -0.22
CX3CR1P49238 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.67□□□□□ -0.22
CX3CR1P49238 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 AC069262.1-201ENST00000539058 672 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 AL512356.2-201ENST00000546955 174 ntBASIC13.67□□□□□ -0.22
CX3CR1P49238 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CR1P49238 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CR1P49238 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.67□□□□□ -0.22
CX3CR1P49238 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CX3CR1P49238 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CR1P49238 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms