Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT6CP48668 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
KRT6CP48668 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 AC092865.5-201ENST00000545435 363 ntBASIC15.1■□□□□ 0.01
KRT6CP48668 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.1■□□□□ 0.01
KRT6CP48668 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT6CP48668 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT6CP48668 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT6CP48668 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT6CP48668 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6CP48668 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6CP48668 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
KRT6CP48668 AP006288.1-201ENST00000446065 395 ntBASIC15.09■□□□□ 0.01
KRT6CP48668 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT6CP48668 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.09■□□□□ 0.01
KRT6CP48668 SNHG9-202ENST00000564014 471 ntBASIC15.09■□□□□ 0.01
KRT6CP48668 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
KRT6CP48668 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT6CP48668 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT6CP48668 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT6CP48668 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.08■□□□□ 0.01
KRT6CP48668 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6CP48668 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6CP48668 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
KRT6CP48668 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT6CP48668 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.08■□□□□ 0.01
KRT6CP48668 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms