Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 AC041040.2-201ENST00000622926 2899 ntBASIC15.3■□□□□ 0.04
SLC1A6P48664 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC1A6P48664 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.29■□□□□ 0.04
SLC1A6P48664 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 GHSR-202ENST00000427970 912 ntBASIC15.29■□□□□ 0.04
SLC1A6P48664 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A6P48664 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 FAM86C2P-203ENST00000528684 1004 ntBASIC15.29■□□□□ 0.04
SLC1A6P48664 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC1A6P48664 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC1A6P48664 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.29■□□□□ 0.04
SLC1A6P48664 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SLC1A6P48664 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 AC092865.6-201ENST00000642101 219 ntBASIC15.29■□□□□ 0.04
SLC1A6P48664 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SLC1A6P48664 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC1A6P48664 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC1A6P48664 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A6P48664 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A6P48664 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A6P48664 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC1A6P48664 RN7SL589P-201ENST00000481268 310 ntBASIC15.28■□□□□ 0.04
SLC1A6P48664 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 AL662844.1-201ENST00000546340 181 ntBASIC15.28■□□□□ 0.04
SLC1A6P48664 AC243562.1-201ENST00000560672 389 ntBASIC15.28■□□□□ 0.04
SLC1A6P48664 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC1A6P48664 SLC25A6P4-201ENST00000586535 553 ntBASIC15.28■□□□□ 0.04
SLC1A6P48664 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.28■□□□□ 0.04
SLC1A6P48664 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC1A6P48664 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.28■□□□□ 0.04
SLC1A6P48664 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC1A6P48664 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC1A6P48664 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SLC1A6P48664 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC1A6P48664 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC1A6P48664 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC1A6P48664 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms