Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.26■□□□□ 0.35
TM4SF4P48230 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 PSMD4P1-201ENST00000433951 1109 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.26■□□□□ 0.35
TM4SF4P48230 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.26■□□□□ 0.35
TM4SF4P48230 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.26■□□□□ 0.35
TM4SF4P48230 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AC027237.1-201ENST00000560942 655 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AP003392.6-201ENST00000607709 325 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 AC107464.3-201ENST00000609172 737 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
TM4SF4P48230 AC244250.3-201ENST00000620749 366 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 AC073911.3-201ENST00000624401 631 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 AC005618.3-201ENST00000624928 458 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TM4SF4P48230 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TM4SF4P48230 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.26■□□□□ 0.35
TM4SF4P48230 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TM4SF4P48230 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.26■□□□□ 0.35
TM4SF4P48230 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.25■□□□□ 0.35
TM4SF4P48230 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.25■□□□□ 0.35
TM4SF4P48230 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 AC092638.2-201ENST00000441105 947 ntBASIC17.25■□□□□ 0.35
TM4SF4P48230 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 RN7SL81P-201ENST00000493781 261 ntBASIC17.25■□□□□ 0.35
TM4SF4P48230 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.25■□□□□ 0.35
TM4SF4P48230 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.25■□□□□ 0.35
TM4SF4P48230 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.25■□□□□ 0.35
TM4SF4P48230 MIR5196-201ENST00000578146 115 ntBASIC17.25■□□□□ 0.35
TM4SF4P48230 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.25■□□□□ 0.35
TM4SF4P48230 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TM4SF4P48230 AC084781.1-201ENST00000613737 656 ntBASIC17.25■□□□□ 0.35
TM4SF4P48230 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TM4SF4P48230 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 LINC00431-202ENST00000636375 159 ntBASIC17.25■□□□□ 0.35
TM4SF4P48230 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.25■□□□□ 0.35
TM4SF4P48230 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TM4SF4P48230 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TM4SF4P48230 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TM4SF4P48230 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.24■□□□□ 0.35
TM4SF4P48230 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.24■□□□□ 0.35
TM4SF4P48230 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 RPL5P21-201ENST00000404620 815 ntBASIC17.24■□□□□ 0.35
TM4SF4P48230 AL357563.1-201ENST00000404728 395 ntBASIC17.24■□□□□ 0.35
TM4SF4P48230 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.24■□□□□ 0.35
TM4SF4P48230 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC17.24■□□□□ 0.35
TM4SF4P48230 AL807761.2-201ENST00000422849 729 ntBASIC17.24■□□□□ 0.35
TM4SF4P48230 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 RPSAP15-201ENST00000448168 861 ntBASIC17.24■□□□□ 0.35
TM4SF4P48230 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17.24■□□□□ 0.35
TM4SF4P48230 MIR3188-201ENST00000583494 85 ntBASIC17.24■□□□□ 0.35
TM4SF4P48230 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.24■□□□□ 0.35
TM4SF4P48230 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TM4SF4P48230 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
TM4SF4P48230 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM4SF4P48230 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms