Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 DRD5P1-201ENST00000456605 1438 ntBASIC14.29□□□□□ -0.12
ABCD3P28288 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.29□□□□□ -0.12
ABCD3P28288 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 AC112693.3-201ENST00000624819 1983 ntBASIC14.29□□□□□ -0.12
ABCD3P28288 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.29□□□□□ -0.12
ABCD3P28288 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ABCD3P28288 C18orf15-201ENST00000623680 2534 ntBASIC14.29□□□□□ -0.12
ABCD3P28288 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 RN7SL692P-201ENST00000464677 288 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.28□□□□□ -0.12
ABCD3P28288 GAPDHP40-201ENST00000505218 1006 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 AP005018.1-201ENST00000525475 301 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 AC120045.2-201ENST00000567334 178 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
ABCD3P28288 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.28□□□□□ -0.12
ABCD3P28288 AC133539.2-201ENST00000604757 467 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 WFDC1-204ENST00000613603 549 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 AL358472.5-202ENST00000641448 1267 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 PPT1-215ENST00000641471 2368 ntBASIC14.28□□□□□ -0.12
ABCD3P28288 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ABCD3P28288 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCD3P28288 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCD3P28288 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.27□□□□□ -0.12
ABCD3P28288 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ABCD3P28288 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCD3P28288 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ABCD3P28288 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCD3P28288 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCD3P28288 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.27□□□□□ -0.12
ABCD3P28288 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.27□□□□□ -0.12
ABCD3P28288 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ABCD3P28288 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ABCD3P28288 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ABCD3P28288 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ABCD3P28288 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 AC098614.1-201ENST00000368528 745 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 AP006294.1-201ENST00000415407 339 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.27□□□□□ -0.13
ABCD3P28288 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.27□□□□□ -0.13
ABCD3P28288 AL359711.2-201ENST00000563105 872 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.27□□□□□ -0.13
ABCD3P28288 AC107373.2-201ENST00000607735 490 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms