Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN3P26045 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN3P26045 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.81■□□□□ 0.12
PTPN3P26045 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.81■□□□□ 0.12
PTPN3P26045 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PTPN3P26045 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.81■□□□□ 0.12
PTPN3P26045 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN3P26045 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 CLK3P2-201ENST00000427566 1453 ntBASIC15.8■□□□□ 0.12
PTPN3P26045 WASH3P-207ENST00000560956 1394 ntBASIC15.8■□□□□ 0.12
PTPN3P26045 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN3P26045 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.8■□□□□ 0.12
PTPN3P26045 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN3P26045 AL645728.2-202ENST00000641679 227 ntBASIC15.8■□□□□ 0.12
PTPN3P26045 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN3P26045 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PTPN3P26045 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 ZBED1P1-201ENST00000502364 1930 ntBASIC15.8■□□□□ 0.12
PTPN3P26045 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN3P26045 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
PTPN3P26045 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN3P26045 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PTPN3P26045 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN3P26045 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN3P26045 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN3P26045 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN3P26045 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN3P26045 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN3P26045 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.79■□□□□ 0.12
PTPN3P26045 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.79■□□□□ 0.12
PTPN3P26045 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.79■□□□□ 0.12
PTPN3P26045 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.79■□□□□ 0.12
PTPN3P26045 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN3P26045 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PTPN3P26045 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.79■□□□□ 0.12
PTPN3P26045 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN3P26045 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms