Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
MMP8P22894 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.27■□□□□ 0.2
MMP8P22894 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.27■□□□□ 0.2
MMP8P22894 SPTLC1P1-201ENST00000447199 261 ntBASIC16.27■□□□□ 0.2
MMP8P22894 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.27■□□□□ 0.2
MMP8P22894 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.27■□□□□ 0.2
MMP8P22894 SAMD11P1-201ENST00000571429 661 ntBASIC16.27■□□□□ 0.2
MMP8P22894 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.27■□□□□ 0.2
MMP8P22894 AL662799.1-202ENST00000614205 422 ntBASIC16.27■□□□□ 0.2
MMP8P22894 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MMP8P22894 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.27■□□□□ 0.19
MMP8P22894 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP8P22894 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
MMP8P22894 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.27■□□□□ 0.19
MMP8P22894 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP8P22894 LINC01101-201ENST00000622953 1884 ntBASIC16.27■□□□□ 0.19
MMP8P22894 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP8P22894 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MMP8P22894 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 AC013726.1-201ENST00000563747 2285 ntBASIC16.26■□□□□ 0.19
MMP8P22894 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.26■□□□□ 0.19
MMP8P22894 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.26■□□□□ 0.19
MMP8P22894 AC026410.3-201ENST00000514280 936 ntBASIC16.26■□□□□ 0.19
MMP8P22894 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.26■□□□□ 0.19
MMP8P22894 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 AC099568.2-201ENST00000609194 695 ntBASIC16.26■□□□□ 0.19
MMP8P22894 AL359258.3-201ENST00000622910 2331 ntBASIC16.26■□□□□ 0.19
MMP8P22894 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.26■□□□□ 0.19
MMP8P22894 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.26■□□□□ 0.19
MMP8P22894 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MMP8P22894 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP8P22894 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP8P22894 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP8P22894 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.25■□□□□ 0.19
MMP8P22894 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP8P22894 AC093004.1-201ENST00000508850 424 ntBASIC16.25■□□□□ 0.19
MMP8P22894 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.25■□□□□ 0.19
MMP8P22894 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.25■□□□□ 0.19
MMP8P22894 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
MMP8P22894 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 AC009118.2-201ENST00000613275 655 ntBASIC16.25■□□□□ 0.19
MMP8P22894 AJ011932.1-201ENST00000621707 465 ntBASIC16.25■□□□□ 0.19
MMP8P22894 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.25■□□□□ 0.19
MMP8P22894 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
MMP8P22894 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MMP8P22894 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms