Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNB2P17787 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRNB2P17787 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
CHRNB2P17787 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNB2P17787 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRNB2P17787 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNB2P17787 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNB2P17787 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNB2P17787 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRNB2P17787 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRNB2P17787 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNB2P17787 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CHRNB2P17787 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNB2P17787 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CHRNB2P17787 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNB2P17787 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CHRNB2P17787 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHRNB2P17787 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNB2P17787 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNB2P17787 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNB2P17787 AC023310.3-201ENST00000557027 670 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 AC100756.1-201ENST00000562736 682 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 AC138749.3-201ENST00000567691 622 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNB2P17787 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 AC116165.1-201ENST00000611806 668 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNB2P17787 AL390755.1-201ENST00000623716 2027 ntBASIC16.39■□□□□ 0.21
CHRNB2P17787 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CHRNB2P17787 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHRNB2P17787 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNB2P17787 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms