Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COL11A1P12107 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.23■□□□□ 0.35
COL11A1P12107 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.23■□□□□ 0.35
COL11A1P12107 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.23■□□□□ 0.35
COL11A1P12107 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL11A1P12107 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 RN7SKP230-201ENST00000365642 335 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.22■□□□□ 0.35
COL11A1P12107 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 FXNP2-201ENST00000411625 547 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 EEF1DP6-201ENST00000449232 372 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.22■□□□□ 0.35
COL11A1P12107 AC116345.2-201ENST00000512837 523 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 AC009779.1-201ENST00000551138 283 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.22■□□□□ 0.35
COL11A1P12107 AL136301.1-201ENST00000615830 422 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COL11A1P12107 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL11A1P12107 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL11A1P12107 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 AC012508.2-201ENST00000567613 1472 ntBASIC17.22■□□□□ 0.35
COL11A1P12107 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.22■□□□□ 0.35
COL11A1P12107 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.22■□□□□ 0.35
COL11A1P12107 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL11A1P12107 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.21■□□□□ 0.35
COL11A1P12107 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.21■□□□□ 0.35
COL11A1P12107 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
COL11A1P12107 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.21■□□□□ 0.35
COL11A1P12107 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
COL11A1P12107 C18orf15-201ENST00000623680 2534 ntBASIC17.21■□□□□ 0.35
COL11A1P12107 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.21■□□□□ 0.35
COL11A1P12107 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.21■□□□□ 0.35
COL11A1P12107 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 E2F3P2-201ENST00000447755 1422 ntBASIC17.21■□□□□ 0.35
COL11A1P12107 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.21■□□□□ 0.35
COL11A1P12107 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL11A1P12107 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.21■□□□□ 0.35
COL11A1P12107 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.21■□□□□ 0.35
COL11A1P12107 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.21■□□□□ 0.35
COL11A1P12107 AC103988.2-201ENST00000561804 725 ntBASIC17.21■□□□□ 0.35
COL11A1P12107 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
COL11A1P12107 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.21■□□□□ 0.34
COL11A1P12107 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.21■□□□□ 0.34
COL11A1P12107 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.21■□□□□ 0.34
COL11A1P12107 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.21■□□□□ 0.34
COL11A1P12107 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.2■□□□□ 0.34
COL11A1P12107 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.2■□□□□ 0.34
COL11A1P12107 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 AC020658.6-201ENST00000623564 1870 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 AC136621.1-201ENST00000624017 2304 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
COL11A1P12107 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.2■□□□□ 0.34
COL11A1P12107 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 AC125604.1-201ENST00000496255 707 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 ALG3P1-201ENST00000508806 1114 ntBASIC17.2■□□□□ 0.34
COL11A1P12107 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.2■□□□□ 0.34
COL11A1P12107 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL11A1P12107 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms