Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SOD2P04179 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SOD2P04179 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.17■□□□□ 0.18
SOD2P04179 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOD2P04179 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SOD2P04179 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SOD2P04179 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SOD2P04179 CLUHP2-201ENST00000426660 1303 ntBASIC16.17■□□□□ 0.18
SOD2P04179 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOD2P04179 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SOD2P04179 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SOD2P04179 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.16■□□□□ 0.18
SOD2P04179 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.16■□□□□ 0.18
SOD2P04179 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 AL136309.1-201ENST00000403917 691 ntBASIC16.16■□□□□ 0.18
SOD2P04179 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.16■□□□□ 0.18
SOD2P04179 HIST2H2BB-201ENST00000449108 381 ntBASIC16.16■□□□□ 0.18
SOD2P04179 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.16■□□□□ 0.18
SOD2P04179 MESTP3-201ENST00000503460 968 ntBASIC16.16■□□□□ 0.18
SOD2P04179 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 AC106872.11-201ENST00000605838 421 ntBASIC16.16■□□□□ 0.18
SOD2P04179 AP001002.3-201ENST00000623482 206 ntBASIC16.16■□□□□ 0.18
SOD2P04179 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SOD2P04179 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOD2P04179 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.16■□□□□ 0.18
SOD2P04179 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.16■□□□□ 0.18
SOD2P04179 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.16■□□□□ 0.18
SOD2P04179 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 AC009090.5-201ENST00000624886 2285 ntBASIC16.15■□□□□ 0.18
SOD2P04179 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.15■□□□□ 0.18
SOD2P04179 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 CICP13-201ENST00000422015 2789 ntBASIC16.15■□□□□ 0.18
SOD2P04179 SERPINA13P-202ENST00000478994 924 ntBASIC16.15■□□□□ 0.18
SOD2P04179 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.15■□□□□ 0.18
SOD2P04179 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 AC004466.1-201ENST00000599515 1080 ntBASIC16.15■□□□□ 0.18
SOD2P04179 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.15■□□□□ 0.18
SOD2P04179 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SOD2P04179 LTB4R2-202ENST00000528054 3092 ntBASIC16.15■□□□□ 0.18
SOD2P04179 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOD2P04179 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOD2P04179 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOD2P04179 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOD2P04179 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOD2P04179 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SOD2P04179 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms