Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.63■□□□□ 0.09
GPC4O75487 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.63■□□□□ 0.09
GPC4O75487 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.63■□□□□ 0.09
GPC4O75487 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
GPC4O75487 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.63■□□□□ 0.09
GPC4O75487 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
GPC4O75487 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
GPC4O75487 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
GPC4O75487 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
GPC4O75487 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
GPC4O75487 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
GPC4O75487 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.62■□□□□ 0.09
GPC4O75487 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.62■□□□□ 0.09
GPC4O75487 DUX4L27-201ENST00000554796 1261 ntBASIC15.62■□□□□ 0.09
GPC4O75487 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.62■□□□□ 0.09
GPC4O75487 MIR4313-201ENST00000580760 101 ntBASIC15.62■□□□□ 0.09
GPC4O75487 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.62■□□□□ 0.09
GPC4O75487 AC097359.3-201ENST00000603982 1210 ntBASIC15.62■□□□□ 0.09
GPC4O75487 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.62■□□□□ 0.09
GPC4O75487 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC4O75487 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC4O75487 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GPC4O75487 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.61■□□□□ 0.09
GPC4O75487 AC136604.1-201ENST00000418535 575 ntBASIC15.61■□□□□ 0.09
GPC4O75487 TREML5P-201ENST00000421694 576 ntBASIC15.61■□□□□ 0.09
GPC4O75487 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.61■□□□□ 0.09
GPC4O75487 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.61■□□□□ 0.09
GPC4O75487 RFPL4AP1-201ENST00000530883 850 ntBASIC15.61■□□□□ 0.09
GPC4O75487 HNRNPUP1-201ENST00000554987 333 ntBASIC15.61■□□□□ 0.09
GPC4O75487 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 AL033527.5-202ENST00000641632 1098 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms