Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 AC005622.1-201ENST00000636801 1703 ntBASIC15.23■□□□□ 0.03
PEX1O43933 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 FAM58DP-201ENST00000428076 619 ntBASIC15.23■□□□□ 0.03
PEX1O43933 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 KRT8P23-201ENST00000560090 1207 ntBASIC15.23■□□□□ 0.03
PEX1O43933 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 AC021097.1-201ENST00000607902 574 ntBASIC15.23■□□□□ 0.03
PEX1O43933 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.23■□□□□ 0.03
PEX1O43933 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PEX1O43933 AC006504.5-208ENST00000588784 2401 ntBASIC15.23■□□□□ 0.03
PEX1O43933 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PEX1O43933 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
PEX1O43933 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PEX1O43933 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.22■□□□□ 0.03
PEX1O43933 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.22■□□□□ 0.03
PEX1O43933 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 LINC01225-203ENST00000563550 1244 ntBASIC15.22■□□□□ 0.03
PEX1O43933 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
PEX1O43933 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PEX1O43933 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PEX1O43933 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PEX1O43933 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PEX1O43933 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.21■□□□□ 0.03
PEX1O43933 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PEX1O43933 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PEX1O43933 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PEX1O43933 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.21■□□□□ 0.03
PEX1O43933 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms