Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 TUBB1P2-201ENST00000422712 1306 ntBASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 TUBB1P1-201ENST00000503144 1300 ntBASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TBC1D3FA6NER0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 MIR1908-201ENST00000410394 80 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CNN2P8-201ENST00000421872 913 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 NUS1P3-201ENST00000423502 862 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC114812.1-204ENST00000449669 728 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC023310.1-201ENST00000554836 735 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC092127.1-201ENST00000567093 3455 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC011270.2-201ENST00000624293 2550 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 AC127383.1-201ENST00000444697 1800 ntBASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.4■□□□□ 0.06
TBC1D3FA6NER0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 FAM8A2P-201ENST00000528813 1142 ntBASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 MIR4525-201ENST00000580000 75 ntBASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.39■□□□□ 0.05
TBC1D3FA6NER0 AC132938.4-201ENST00000623835 848 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms