Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.2■□□□□ 0.02
CSNK1G3Q9Y6M4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AP001582.1-201ENST00000525856 295 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 DUX4L45-201ENST00000566406 1057 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 GNRHR2-203ENST00000581100 1187 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 MIR4538-201ENST00000581377 78 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AC008687.7-202ENST00000637404 953 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AL365203.3-201ENST00000609742 2057 ntBASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CSNK1G3Q9Y6M4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC025279.2-201ENST00000569730 653 ntBASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.18■□□□□ 0.02
CSNK1G3Q9Y6M4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms