Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AC074338.1-201ENST00000416825 156 ntBASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AL132655.2-201ENST00000596276 594 ntBASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AC097359.3-201ENST00000603982 1210 ntBASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 AL161772.1-201ENST00000610494 4412 ntBASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 CICP13-201ENST00000422015 2789 ntBASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPH3AQ9Y2J0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AC136604.1-201ENST00000418535 575 ntBASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 KRT18P64-201ENST00000434946 1219 ntBASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 TPRX2P-201ENST00000535362 881 ntBASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 MIR4313-201ENST00000580760 101 ntBASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPH3AQ9Y2J0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RPH3AQ9Y2J0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms