Protein–RNA interactions for Protein: Q9NYP9

MIS18A, Protein Mis18-alpha, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MIS18AQ9NYP9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 MIR1908-201ENST00000410394 80 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 FO681548.1-201ENST00000455617 1132 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 KRT18P25-201ENST00000508931 1278 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 PRSS30P-206ENST00000641773 873 ntBASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MIS18AQ9NYP9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 REXO1L5P-201ENST00000622260 2098 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 C2orf27AP3-201ENST00000434123 579 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AL354718.3-201ENST00000616414 581 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 CR382287.1-201ENST00000623954 586 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 MST1L-201ENST00000442552 2185 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 AL157414.3-201ENST00000624276 1954 ntBASIC19.92■□□□□ 0.78
MIS18AQ9NYP9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AC114812.1-204ENST00000449669 728 ntBASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AC009542.2-202ENST00000619004 1067 ntBASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 RHOXF1P1-202ENST00000635473 501 ntBASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MIS18AQ9NYP9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MIS18AQ9NYP9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms