Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 CETN4P-206ENST00000642099 2168 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 FGD5P1-202ENST00000614866 2498 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC074338.1-201ENST00000416825 156 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 SERBP1P3-201ENST00000459980 809 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 SLED1-202ENST00000512051 380 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC079781.4-201ENST00000641908 219 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AJ011931.1-201ENST00000618749 2492 ntBASIC14.97□□□□□ -0.01
LRTM1Q9HBL6 AC097376.2-205ENST00000610159 5334 ntBASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AC211486.1-202ENST00000416371 468 ntBASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AC211476.1-201ENST00000503899 468 ntBASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 AC007292.2-201ENST00000593524 1812 ntBASIC14.96□□□□□ -0.01
LRTM1Q9HBL6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 AL136379.1-201ENST00000623471 2642 ntBASIC14.96□□□□□ -0.02
LRTM1Q9HBL6 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms