Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 CLEC2A-201ENST00000339766 732 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RNY4P14-201ENST00000363656 96 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 Y_RNA.279-201ENST00000364763 95 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RNU6-1062P-201ENST00000383908 107 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RNU6-157P-201ENST00000383957 107 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL356776.1-201ENST00000406574 447 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC004448.2-201ENST00000422360 586 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 ZDHHC20P2-201ENST00000424108 429 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 CNOT7P1-201ENST00000429006 852 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC02020-204ENST00000435548 604 ntTSL 4 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL731563.1-201ENST00000442202 214 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 OR7E111P-201ENST00000442229 1014 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC013267.1-201ENST00000458227 267 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC018710.1-201ENST00000506509 158 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 RN7SKP298-201ENST00000515950 94 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 OR4A44P-201ENST00000524504 948 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL121809.1-201ENST00000556389 849 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC093283.1-201ENST00000565306 1075 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC011260.1-201ENST00000578420 472 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC007992.2-201ENST00000604771 835 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL139041.1-201ENST00000605480 610 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL445423.1-201ENST00000609941 536 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 ST7-AS1_2.1-201ENST00000615247 111 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC087588.2-201ENST00000617667 426 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 LINC00244-201ENST00000625073 613 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 AC018445.3-201ENST00000624177 1945 ntBASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
KRTAP3-3Q9BYR6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 BX323043.1-201ENST00000641006 1765 ntBASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
KRTAP3-3Q9BYR6 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms