Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 KLF2P2-201ENST00000416807 1039 ntBASIC16.18■□□□□ 0.18
SMOQ99835 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 AL022328.1-201ENST00000610050 478 ntBASIC16.18■□□□□ 0.18
SMOQ99835 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SMOQ99835 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
SMOQ99835 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMOQ99835 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.17■□□□□ 0.18
SMOQ99835 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 AL645937.2-201ENST00000396808 931 ntBASIC16.17■□□□□ 0.18
SMOQ99835 NUS1P3-201ENST00000423502 862 ntBASIC16.17■□□□□ 0.18
SMOQ99835 AL355864.2-201ENST00000447420 863 ntBASIC16.17■□□□□ 0.18
SMOQ99835 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.17■□□□□ 0.18
SMOQ99835 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.17■□□□□ 0.18
SMOQ99835 GNRHR2-203ENST00000581100 1187 ntBASIC16.17■□□□□ 0.18
SMOQ99835 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.17■□□□□ 0.18
SMOQ99835 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
SMOQ99835 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SMOQ99835 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.17■□□□□ 0.18
SMOQ99835 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SMOQ99835 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.17■□□□□ 0.18
SMOQ99835 AC023024.2-201ENST00000623561 1993 ntBASIC16.17■□□□□ 0.18
SMOQ99835 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SMOQ99835 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 MST1L-201ENST00000442552 2185 ntBASIC16.16■□□□□ 0.18
SMOQ99835 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 AC126365.1-201ENST00000578585 1514 ntBASIC16.16■□□□□ 0.18
SMOQ99835 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 AL359258.3-201ENST00000622910 2331 ntBASIC16.16■□□□□ 0.18
SMOQ99835 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 AL139094.1-201ENST00000405549 1188 ntBASIC16.16■□□□□ 0.18
SMOQ99835 AC114812.1-204ENST00000449669 728 ntBASIC16.16■□□□□ 0.18
SMOQ99835 IGHV3-71-201ENST00000523324 359 ntBASIC16.16■□□□□ 0.18
SMOQ99835 SNX29P1-201ENST00000548357 1007 ntBASIC16.16■□□□□ 0.18
SMOQ99835 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms