Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDCA3Q99618 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC010141.1-201ENST00000411585 623 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 ISCA2P1-201ENST00000425548 448 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 PDIA3P2-201ENST00000428073 158 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 AC098935.1-201ENST00000446057 611 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 NOC2LP1-201ENST00000450578 752 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 CEP164P1-201ENST00000455142 418 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.9■□□□□ 0.14
CDCA3Q99618 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC103988.2-201ENST00000561804 725 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 MIR4683-201ENST00000579659 81 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 AC004466.1-201ENST00000599515 1080 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC012044.1-201ENST00000603431 297 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 AC103691.2-201ENST00000618824 433 ntBASIC15.9■□□□□ 0.14
CDCA3Q99618 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDCA3Q99618 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDCA3Q99618 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDCA3Q99618 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDCA3Q99618 FZD10-202ENST00000539839 3282 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.89■□□□□ 0.13
CDCA3Q99618 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 RTN3P1-201ENST00000536295 711 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.89■□□□□ 0.13
CDCA3Q99618 AC242376.1-201ENST00000559033 726 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 RN7SL555P-201ENST00000584742 339 ntBASIC15.89■□□□□ 0.13
CDCA3Q99618 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.89■□□□□ 0.13
CDCA3Q99618 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDCA3Q99618 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.89■□□□□ 0.13
CDCA3Q99618 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDCA3Q99618 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
CDCA3Q99618 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDCA3Q99618 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms