Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.57■□□□□ 0.4
DHX58Q96C10 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.57■□□□□ 0.4
DHX58Q96C10 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.57■□□□□ 0.4
DHX58Q96C10 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.57■□□□□ 0.4
DHX58Q96C10 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.57■□□□□ 0.4
DHX58Q96C10 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.57■□□□□ 0.4
DHX58Q96C10 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DHX58Q96C10 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DHX58Q96C10 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.57■□□□□ 0.4
DHX58Q96C10 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC023908.3-201ENST00000564211 3047 ntBASIC17.56■□□□□ 0.4
DHX58Q96C10 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.56■□□□□ 0.4
DHX58Q96C10 RN7SL618P-201ENST00000477850 296 ntBASIC17.56■□□□□ 0.4
DHX58Q96C10 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC010336.2-201ENST00000564226 506 ntBASIC17.56■□□□□ 0.4
DHX58Q96C10 AC051619.7-201ENST00000568314 623 ntBASIC17.56■□□□□ 0.4
DHX58Q96C10 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC106881.1-201ENST00000605849 3329 ntBASIC17.56■□□□□ 0.4
DHX58Q96C10 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.56■□□□□ 0.4
DHX58Q96C10 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DHX58Q96C10 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
DHX58Q96C10 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.55■□□□□ 0.4
DHX58Q96C10 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 RPL5P21-201ENST00000404620 815 ntBASIC17.55■□□□□ 0.4
DHX58Q96C10 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.55■□□□□ 0.4
DHX58Q96C10 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.55■□□□□ 0.4
DHX58Q96C10 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 AC069120.2-201ENST00000524091 540 ntBASIC17.55■□□□□ 0.4
DHX58Q96C10 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.55■□□□□ 0.4
DHX58Q96C10 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.55■□□□□ 0.4
DHX58Q96C10 AP001160.2-201ENST00000596071 487 ntBASIC17.55■□□□□ 0.4
DHX58Q96C10 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 AL109936.8-201ENST00000641772 604 ntBASIC17.55■□□□□ 0.4
DHX58Q96C10 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.55■□□□□ 0.4
DHX58Q96C10 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DHX58Q96C10 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DHX58Q96C10 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms