Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ACA64.2-201ENST00000459014 129 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 IGHV3-71-201ENST00000523324 359 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 AP001582.1-201ENST00000525856 295 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 BX539320.1-201ENST00000623759 877 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.2■□□□□ 0.5
STAG1Q8WVM7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
STAG1Q8WVM7 AC138035.3-201ENST00000622706 2791 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 ACKR1-201ENST00000368121 1240 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 RAB43P1-201ENST00000561790 589 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AC015936.2-201ENST00000593177 259 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AC008735.3-201ENST00000596646 500 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 PRSS30P-206ENST00000641773 873 ntBASIC18.19■□□□□ 0.5
STAG1Q8WVM7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
STAG1Q8WVM7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 AL645937.2-201ENST00000396808 931 ntBASIC18.18■□□□□ 0.5
STAG1Q8WVM7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
STAG1Q8WVM7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms