Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 ACKR1-201ENST00000368121 1240 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 FAM197Y7-201ENST00000432892 766 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 MTX1P1-201ENST00000440904 838 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC078819.1-201ENST00000547454 765 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC012085.1-201ENST00000548270 765 ntBASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.75■□□□□ 0.43
U2AF1L4Q8WU68 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC006449.6-201ENST00000612330 2296 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AL691432.1-201ENST00000596308 1422 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 KRT18P64-201ENST00000434946 1219 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 RPSAP36-202ENST00000494591 1261 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC138951.2-201ENST00000623455 1161 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 AC005622.1-201ENST00000636801 1703 ntBASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
U2AF1L4Q8WU68 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
U2AF1L4Q8WU68 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms