Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 RPL37AP1-201ENST00000412502 279 ntBASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 RN7SL618P-201ENST00000477850 296 ntBASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SLED1-202ENST00000512051 380 ntBASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SPDYE12P-201ENST00000618416 771 ntBASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAF3IP1Q8TDR0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AL139400.1-201ENST00000366220 510 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 RPL5P21-201ENST00000404620 815 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 KLF2P3-201ENST00000451977 1087 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC069120.2-201ENST00000524091 540 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC023511.2-201ENST00000618803 211 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC073592.8-201ENST00000624126 511 ntBASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAF3IP1Q8TDR0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAF3IP1Q8TDR0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 619.5 ms