Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 AC239800.4-201ENST00000603712 296 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 CU639417.3-201ENST00000624240 1404 ntBASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
FNDC9Q8TBE3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 AC126177.1-201ENST00000547829 2218 ntBASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
FNDC9Q8TBE3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 AC063926.2-201ENST00000623766 1308 ntBASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 RN7SL752P-201ENST00000463779 287 ntBASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.02□□□□□ -0.17
FNDC9Q8TBE3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 FAM86LP-201ENST00000478302 853 ntBASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 TMEM261P1-201ENST00000604899 340 ntBASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.01□□□□□ -0.17
FNDC9Q8TBE3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms