Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRFBP1Q8NEF9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC104640.1-201ENST00000562617 2109 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC000095.1-201ENST00000603208 874 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC004840.1-201ENST00000636359 365 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AL645728.2-202ENST00000641679 227 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC126365.1-201ENST00000578585 1514 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 AC009090.5-201ENST00000624886 2285 ntBASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRFBP1Q8NEF9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 AC126177.1-201ENST00000547829 2218 ntBASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 DOC2GP-202ENST00000514950 1163 ntBASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 AC011467.4-201ENST00000594891 528 ntBASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 AC092384.3-202ENST00000564646 2873 ntBASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRFBP1Q8NEF9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms