Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AC138466.3-201ENST00000619983 221 ntBASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPAS4Q8IUM7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC055811.4-201ENST00000624039 1754 ntBASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 MIR769-201ENST00000390225 118 ntBASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC005730.2-201ENST00000564549 1184 ntBASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 AC024909.3-201ENST00000611513 2257 ntBASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPAS4Q8IUM7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AP003680.1-201ENST00000598970 3660 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AL008707.1-201ENST00000422498 534 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 MESTP3-201ENST00000503460 968 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AC100850.1-201ENST00000506768 649 ntBASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NPAS4Q8IUM7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms