Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.2■□□□□ 0.18
RFX6Q8HWS3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 Z97205.2-201ENST00000564697 1639 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 RN7SL618P-201ENST00000477850 296 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AL512361.1-201ENST00000554200 418 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC073592.8-201ENST00000624126 511 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AF228730.6-201ENST00000641497 218 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC084121.3-201ENST00000641716 218 ntBASIC16.19■□□□□ 0.18
RFX6Q8HWS3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.19■□□□□ 0.18
RFX6Q8HWS3 CICP11-201ENST00000434745 2827 ntBASIC16.18■□□□□ 0.18
RFX6Q8HWS3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 KLF2P3-201ENST00000451977 1087 ntBASIC16.18■□□□□ 0.18
RFX6Q8HWS3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 AC069120.2-201ENST00000524091 540 ntBASIC16.18■□□□□ 0.18
RFX6Q8HWS3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.18■□□□□ 0.18
RFX6Q8HWS3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RFX6Q8HWS3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms