Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATG4DQ86TL0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 FAM207CP-201ENST00000443486 507 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 MEIS3P1-201ENST00000495167 958 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 SPDYE18-201ENST00000510091 1050 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AC135586.1-201ENST00000539323 574 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AL391069.4-201ENST00000609583 481 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AC004790.1-201ENST00000612686 536 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
ATG4DQ86TL0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ATG4DQ86TL0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 LINC00528-201ENST00000600723 2160 ntBASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AC104457.1-201ENST00000401024 814 ntBASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AL589987.1-201ENST00000453380 819 ntBASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AC105233.6-201ENST00000642093 218 ntBASIC14.06□□□□□ -0.16
ATG4DQ86TL0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ATG4DQ86TL0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms