Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 FNTAP2-201ENST00000430308 634 ntBASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AC078819.1-201ENST00000547454 765 ntBASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AC012085.1-201ENST00000548270 765 ntBASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTC1Q2NKJ3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 FAM197Y7-201ENST00000432892 766 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MIR4722-201ENST00000578292 60 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MIR3619-201ENST00000579667 83 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 GGT3P-204ENST00000453783 1664 ntBASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CTC1Q2NKJ3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 AHCYP2-201ENST00000430630 1300 ntBASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CTC1Q2NKJ3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms