Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDS5AQ29RF7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PDS5AQ29RF7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDS5AQ29RF7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PDS5AQ29RF7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDS5AQ29RF7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDS5AQ29RF7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 FAM8A4P-201ENST00000435433 1213 ntBASIC18.39■□□□□ 0.53
PDS5AQ29RF7 AC022494.1-201ENST00000466044 728 ntBASIC18.39■□□□□ 0.53
PDS5AQ29RF7 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 RN7SL713P-201ENST00000582127 302 ntBASIC18.39■□□□□ 0.53
PDS5AQ29RF7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 AC138466.3-201ENST00000619983 221 ntBASIC18.39■□□□□ 0.53
PDS5AQ29RF7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
PDS5AQ29RF7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 KRT8P44-201ENST00000441609 1350 ntBASIC18.38■□□□□ 0.53
PDS5AQ29RF7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 CICP11-201ENST00000434745 2827 ntBASIC18.38■□□□□ 0.53
PDS5AQ29RF7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 RN7SL219P-201ENST00000582872 296 ntBASIC18.38■□□□□ 0.53
PDS5AQ29RF7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDS5AQ29RF7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 MST1L-201ENST00000442552 2185 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 TMBIM7P-203ENST00000641617 1718 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CLUHP2-201ENST00000426660 1303 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 REXO1L5P-201ENST00000622260 2098 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 AC008741.2-201ENST00000612792 3115 ntBASIC18.37■□□□□ 0.53
PDS5AQ29RF7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.37■□□□□ 0.53
PDS5AQ29RF7 HOMER2P2-201ENST00000451621 847 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms