Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 DOC2GP-204ENST00000639052 2548 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN6P56747 NUS1P3-201ENST00000423502 862 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN6P56747 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN6P56747 MPRIPP1-201ENST00000452433 1089 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 GAPDHP40-201ENST00000505218 1006 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.86□□□□□ -0.03
CLDN6P56747 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 AC097724.1-201ENST00000609581 426 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.86□□□□□ -0.03
CLDN6P56747 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
CLDN6P56747 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN6P56747 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN6P56747 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.86□□□□□ -0.03
CLDN6P56747 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN6P56747 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLDN6P56747 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.85□□□□□ -0.03
CLDN6P56747 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 CYP46A4P-201ENST00000414953 267 ntBASIC14.85□□□□□ -0.03
CLDN6P56747 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.85□□□□□ -0.03
CLDN6P56747 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CLDN6P56747 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.85□□□□□ -0.03
CLDN6P56747 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN6P56747 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 AP003680.1-201ENST00000598970 3660 ntBASIC14.85□□□□□ -0.03
CLDN6P56747 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN6P56747 AC148477.4-201ENST00000613430 1793 ntBASIC14.85□□□□□ -0.03
CLDN6P56747 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CLDN6P56747 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLDN6P56747 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN6P56747 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN6P56747 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CLDN6P56747 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN6P56747 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms