Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 DRD5P1-201ENST00000456605 1438 ntBASIC11.37□□□□□ -0.59
APOC4P55056 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
APOC4P55056 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 AC084018.2-201ENST00000613093 2607 ntBASIC11.37□□□□□ -0.59
APOC4P55056 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC4P55056 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
APOC4P55056 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
APOC4P55056 AC005229.1-201ENST00000392885 409 ntBASIC11.37□□□□□ -0.59
APOC4P55056 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 RPL5P21-201ENST00000404620 815 ntBASIC11.37□□□□□ -0.59
APOC4P55056 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.37□□□□□ -0.59
APOC4P55056 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ARSEP1-201ENST00000420443 635 ntBASIC11.37□□□□□ -0.59
APOC4P55056 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
APOC4P55056 NUS1P3-201ENST00000423502 862 ntBASIC11.37□□□□□ -0.59
APOC4P55056 ACA64.2-201ENST00000459014 129 ntBASIC11.37□□□□□ -0.59
APOC4P55056 AP001582.1-201ENST00000525856 295 ntBASIC11.37□□□□□ -0.59
APOC4P55056 SLC25A47P1-201ENST00000531577 414 ntBASIC11.37□□□□□ -0.59
APOC4P55056 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.37□□□□□ -0.59
APOC4P55056 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 AL008721.1-201ENST00000609964 604 ntBASIC11.37□□□□□ -0.59
APOC4P55056 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
APOC4P55056 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.37□□□□□ -0.59
APOC4P55056 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 AMT-233ENST00000636522 1620 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 AC018665.1-201ENST00000622927 1362 ntBASIC11.37□□□□□ -0.59
APOC4P55056 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOC4P55056 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.37□□□□□ -0.59
APOC4P55056 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC11.37□□□□□ -0.59
APOC4P55056 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
APOC4P55056 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 ACKR1-201ENST00000368121 1240 ntBASIC11.36□□□□□ -0.59
APOC4P55056 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 BAATP1-201ENST00000412284 1225 ntBASIC11.36□□□□□ -0.59
APOC4P55056 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 C2orf27AP3-201ENST00000434123 579 ntBASIC11.36□□□□□ -0.59
APOC4P55056 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms