Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CLCN3P51790 FAM86MP-201ENST00000340703 885 ntBASIC16.96■□□□□ 0.31
CLCN3P51790 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CLCN3P51790 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 FAM21FP-201ENST00000426241 1131 ntBASIC16.96■□□□□ 0.31
CLCN3P51790 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.96■□□□□ 0.31
CLCN3P51790 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.96■□□□□ 0.31
CLCN3P51790 AC138951.2-201ENST00000623455 1161 ntBASIC16.96■□□□□ 0.31
CLCN3P51790 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.96■□□□□ 0.31
CLCN3P51790 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLCN3P51790 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLCN3P51790 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN3P51790 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN3P51790 AC090616.6-203ENST00000579186 1945 ntBASIC16.96■□□□□ 0.3
CLCN3P51790 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.96■□□□□ 0.3
CLCN3P51790 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CLCN3P51790 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLCN3P51790 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLCN3P51790 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.95■□□□□ 0.3
CLCN3P51790 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.95■□□□□ 0.3
CLCN3P51790 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.95■□□□□ 0.3
CLCN3P51790 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 NUS1P3-201ENST00000423502 862 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 AC114812.1-204ENST00000449669 728 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 RNA5SP412-201ENST00000516234 123 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.95■□□□□ 0.3
CLCN3P51790 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.95■□□□□ 0.3
CLCN3P51790 SAMD11P1-201ENST00000571429 661 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 AC009542.2-202ENST00000619004 1067 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 PRSS30P-206ENST00000641773 873 ntBASIC16.95■□□□□ 0.3
CLCN3P51790 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CLCN3P51790 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLCN3P51790 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.95■□□□□ 0.3
CLCN3P51790 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
CLCN3P51790 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLCN3P51790 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN3P51790 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CLCN3P51790 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 AL139094.1-201ENST00000405549 1188 ntBASIC16.94■□□□□ 0.3
CLCN3P51790 MIR1908-201ENST00000410394 80 ntBASIC16.94■□□□□ 0.3
CLCN3P51790 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.94■□□□□ 0.3
CLCN3P51790 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN3P51790 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN3P51790 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.94■□□□□ 0.3
CLCN3P51790 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.94■□□□□ 0.3
CLCN3P51790 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.94■□□□□ 0.3
CLCN3P51790 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.94■□□□□ 0.3
CLCN3P51790 MIR4538-201ENST00000581377 78 ntBASIC16.94■□□□□ 0.3
CLCN3P51790 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN3P51790 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.94■□□□□ 0.3
CLCN3P51790 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLCN3P51790 CICP11-201ENST00000434745 2827 ntBASIC16.94■□□□□ 0.3
CLCN3P51790 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLCN3P51790 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms