Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CX3CR1P49238 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CR1P49238 TARDBPP1-201ENST00000442013 1203 ntBASIC13.7□□□□□ -0.22
CX3CR1P49238 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CR1P49238 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.7□□□□□ -0.22
CX3CR1P49238 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CX3CR1P49238 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.7□□□□□ -0.22
CX3CR1P49238 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CX3CR1P49238 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CX3CR1P49238 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CR1P49238 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CX3CR1P49238 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.69□□□□□ -0.22
CX3CR1P49238 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.69□□□□□ -0.22
CX3CR1P49238 AP006288.1-201ENST00000446065 395 ntBASIC13.69□□□□□ -0.22
CX3CR1P49238 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 SERBP1P3-201ENST00000459980 809 ntBASIC13.69□□□□□ -0.22
CX3CR1P49238 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CX3CR1P49238 AL596442.2-201ENST00000610240 980 ntBASIC13.69□□□□□ -0.22
CX3CR1P49238 MIR6069-201ENST00000620069 79 ntBASIC13.69□□□□□ -0.22
CX3CR1P49238 AC134684.3-201ENST00000641758 218 ntBASIC13.69□□□□□ -0.22
CX3CR1P49238 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.69□□□□□ -0.22
CX3CR1P49238 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CR1P49238 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.69□□□□□ -0.22
CX3CR1P49238 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CR1P49238 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.69□□□□□ -0.22
CX3CR1P49238 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CX3CR1P49238 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CR1P49238 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms