Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT9P35527 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT9P35527 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT9P35527 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT9P35527 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT9P35527 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT9P35527 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
KRT9P35527 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 AZGP1P1-201ENST00000411909 902 ntBASIC17.04■□□□□ 0.32
KRT9P35527 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 AC136604.1-201ENST00000418535 575 ntBASIC17.04■□□□□ 0.32
KRT9P35527 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 SPDYE14P-201ENST00000442619 822 ntBASIC17.04■□□□□ 0.32
KRT9P35527 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
KRT9P35527 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT9P35527 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT9P35527 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT9P35527 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT9P35527 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.03■□□□□ 0.32
KRT9P35527 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
KRT9P35527 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KRT9P35527 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
KRT9P35527 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT9P35527 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT9P35527 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT9P35527 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT9P35527 DNAJB3-202ENST00000449667 1266 ntBASIC17.03■□□□□ 0.32
KRT9P35527 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT9P35527 AC105021.1-202ENST00000570572 669 ntBASIC17.03■□□□□ 0.32
KRT9P35527 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
KRT9P35527 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT9P35527 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
KRT9P35527 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT9P35527 AC005912.2-201ENST00000619492 2400 ntBASIC17.02■□□□□ 0.32
KRT9P35527 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT9P35527 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT9P35527 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT9P35527 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT9P35527 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms