Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
RORAP35398 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.78□□□□□ -0.04
RORAP35398 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.78□□□□□ -0.04
RORAP35398 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RORAP35398 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.77□□□□□ -0.04
RORAP35398 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.77□□□□□ -0.04
RORAP35398 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.77□□□□□ -0.04
RORAP35398 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RORAP35398 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.77□□□□□ -0.04
RORAP35398 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RORAP35398 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.04
RORAP35398 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 HYMAI-201ENST00000635591 3347 ntBASIC14.77□□□□□ -0.04
RORAP35398 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RORAP35398 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 AP005482.1-201ENST00000563722 1273 ntBASIC14.77□□□□□ -0.05
RORAP35398 AC015910.1-201ENST00000579400 975 ntBASIC14.77□□□□□ -0.05
RORAP35398 CLUHP6-201ENST00000580789 941 ntBASIC14.77□□□□□ -0.05
RORAP35398 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.77□□□□□ -0.05
RORAP35398 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 MIR6775-201ENST00000617557 69 ntBASIC14.77□□□□□ -0.05
RORAP35398 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 AC008741.2-201ENST00000612792 3115 ntBASIC14.77□□□□□ -0.05
RORAP35398 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.77□□□□□ -0.05
RORAP35398 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RORAP35398 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RORAP35398 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
RORAP35398 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 DRD5P1-201ENST00000456605 1438 ntBASIC14.76□□□□□ -0.05
RORAP35398 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RORAP35398 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RORAP35398 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 ANKRD19P-201ENST00000338192 862 ntBASIC14.76□□□□□ -0.05
RORAP35398 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RORAP35398 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.76□□□□□ -0.05
RORAP35398 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.76□□□□□ -0.05
RORAP35398 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RORAP35398 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RORAP35398 AC068587.3-201ENST00000526613 355 ntBASIC14.76□□□□□ -0.05
RORAP35398 PTP4A1P2-201ENST00000546033 454 ntBASIC14.76□□□□□ -0.05
RORAP35398 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms