Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRNA3P32297 PHKG1P2-201ENST00000457537 863 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA3P32297 MIR4745-201ENST00000577608 62 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.42■□□□□ 0.22
CHRNA3P32297 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.42■□□□□ 0.22
CHRNA3P32297 AL133215.2-201ENST00000609242 977 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CHRNA3P32297 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA3P32297 KRT8P37-201ENST00000451609 1420 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA3P32297 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 AC232323.1-201ENST00000540724 2099 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 REXO1L5P-201ENST00000622260 2098 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 PCDHA3-202ENST00000532566 4594 ntBASIC16.42■□□□□ 0.22
CHRNA3P32297 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHRNA3P32297 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CHRNA3P32297 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.42■□□□□ 0.22
CHRNA3P32297 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHRNA3P32297 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA3P32297 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.41■□□□□ 0.22
CHRNA3P32297 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHRNA3P32297 EEF1DP4-201ENST00000446006 880 ntBASIC16.41■□□□□ 0.22
CHRNA3P32297 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.41■□□□□ 0.22
CHRNA3P32297 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CHRNA3P32297 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRNA3P32297 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRNA3P32297 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.41■□□□□ 0.22
CHRNA3P32297 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA3P32297 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHRNA3P32297 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHRNA3P32297 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHRNA3P32297 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHRNA3P32297 AC005089.1-201ENST00000619486 2241 ntBASIC16.4■□□□□ 0.22
CHRNA3P32297 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRNA3P32297 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.4■□□□□ 0.22
CHRNA3P32297 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.4■□□□□ 0.22
CHRNA3P32297 UGT1A2P-201ENST00000454886 866 ntBASIC16.4■□□□□ 0.22
CHRNA3P32297 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.4■□□□□ 0.22
CHRNA3P32297 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA3P32297 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA3P32297 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CHRNA3P32297 AC026979.3-201ENST00000607315 403 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms